Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs948562
rs948562
G 0.800 GeneticVariation GWASDB Susceptibility loci associated with specific and shared subtypes of lymphoid malignancies. 23349640

2013

dbSNP: rs948562
rs948562
G 0.800 GeneticVariation GWASCAT Susceptibility loci associated with specific and shared subtypes of lymphoid malignancies. 23349640

2013

dbSNP: rs25487
rs25487
0.020 GeneticVariation BEFREE Lack of association between DNA base excision repair gene XRCC1 Gln399Arg polymorphism and risk of malignant lymphoma in Japan. 15104288

2004

dbSNP: rs25487
rs25487
0.020 GeneticVariation BEFREE In this work, we retrospectively evaluated the influence of an XRCC1 polymorphism (rs25487) on the treatment results in a series of 73 patients with lymphoma subjected to ASCT. 21463129

2011

dbSNP: rs1800975
rs1800975
XPA
0.010 GeneticVariation BEFREE Our results suggest that the rs1800975, rs17655 and rs1805087 SNPs in DNA repair and synthesis of genes do not seem to play a major role in lymphoma susceptibility. 23818366

2013

dbSNP: rs1346044
rs1346044
WRN
0.010 GeneticVariation BEFREE WRN Cys1367Arg was associated with decreased risk of NHL overall (OR: 0.71; 95% CI: 0.56-0.91; P=0.007) and DLBCL (OR: 0.66; 95% CI: 0.45-0.95; P=0.024), as well as follicular and marginal zone lymphomas. 16738949

2006

dbSNP: rs1351687973
rs1351687973
0.010 GeneticVariation BEFREE PCR-SSCP and direct DNA sequencing of exons 2 to 14 of p73 revealed a missense mutation in one primary lymphoma: a G-to-A transition, with Glu291Lys change. 11461077

2001

dbSNP: rs535311760
rs535311760
0.010 GeneticVariation BEFREE PCR-SSCP and direct DNA sequencing of exons 2 to 14 of p73 revealed a missense mutation in one primary lymphoma: a G-to-A transition, with Glu291Lys change. 11461077

2001

dbSNP: rs11540652
rs11540652
0.720 GeneticVariation BEFREE This was associated with a twofold higher T-lymphoma proliferation in R248Q/- mice compared with G245S/- and null mice. 23538418

2013

dbSNP: rs11540652
rs11540652
T 0.720 GeneticVariation CLINVAR

dbSNP: rs11540652
rs11540652
0.720 GeneticVariation BEFREE We previously showed that the HSP90 inhibitor ganetespib potently suppresses T-lymphoma initiation and progression and extends overall survival (OS) in hotspot knockin mice expressing the p53 gain-of-function mutants R175H and R248Q (mutp53) by 30-59%. 28300840

2017

dbSNP: rs1042522
rs1042522
0.010 GeneticVariation BEFREE Through searching PubMed databases (or hand searching) up to April 2012 using the following MeSH terms and keywords: "p53", "codon 72" "polymorphism" and "leukemia", or "lymphoma", or "myeloma", thirteen were identified as eligible articles in this meta-analysis for p53 Arg72Pro polymorphism (2,731 cases and 7, 356 controls), including nine studies on leukemia (1,266 cases and 4, 474 controls), three studies on lymphoma (1,359 cases and 2,652 controls), and one study on myeloma. 23029260

2012

dbSNP: rs1131691014
rs1131691014
0.010 GeneticVariation BEFREE Through searching PubMed databases (or hand searching) up to April 2012 using the following MeSH terms and keywords: "p53", "codon 72" "polymorphism" and "leukemia", or "lymphoma", or "myeloma", thirteen were identified as eligible articles in this meta-analysis for p53 Arg72Pro polymorphism (2,731 cases and 7, 356 controls), including nine studies on leukemia (1,266 cases and 4, 474 controls), three studies on lymphoma (1,359 cases and 2,652 controls), and one study on myeloma. 23029260

2012

dbSNP: rs1555525126
rs1555525126
0.010 GeneticVariation BEFREE PCR-SSCP and direct DNA sequencing of exons 2 to 14 of p73 revealed a missense mutation in one primary lymphoma: a G-to-A transition, with Glu291Lys change. 11461077

2001

dbSNP: rs28934578
rs28934578
0.010 GeneticVariation BEFREE We previously showed that the HSP90 inhibitor ganetespib potently suppresses T-lymphoma initiation and progression and extends overall survival (OS) in hotspot knockin mice expressing the p53 gain-of-function mutants R175H and R248Q (mutp53) by 30-59%. 28300840

2017

dbSNP: rs563378859
rs563378859
0.010 GeneticVariation BEFREE We propose that similarly to typical human MCL and its blastoid or cyclin-D1 variants that correspond to the same genetic entity, MCL-like lymphomas of c-myc-3'RR/ p53+/- mice and c-myc-3'RR/Cdk4(R24C) mice represent a spectrum of the same entity. 22592113

2012

dbSNP: rs867114783
rs867114783
0.010 GeneticVariation BEFREE TP53(R167H/R167H) mutant pigs primarily developed lymphomas and osteogenic tumors, recapitulating the tumor types observed in mice and humans expressing orthologous TP53 mutant alleles. 25105366

2014

dbSNP: rs878854066
rs878854066
0.010 GeneticVariation BEFREE Through searching PubMed databases (or hand searching) up to April 2012 using the following MeSH terms and keywords: "p53", "codon 72" "polymorphism" and "leukemia", or "lymphoma", or "myeloma", thirteen were identified as eligible articles in this meta-analysis for p53 Arg72Pro polymorphism (2,731 cases and 7, 356 controls), including nine studies on leukemia (1,266 cases and 4, 474 controls), three studies on lymphoma (1,359 cases and 2,652 controls), and one study on myeloma. 23029260

2012

dbSNP: rs879253942
rs879253942
0.010 GeneticVariation BEFREE The discovery of MYD88 L265P mutations in the vast majority of LPLs has had a major impact on the study of these lymphomas. 26454445

2016

dbSNP: rs867830180
rs867830180
0.010 GeneticVariation BEFREE Herein we performed a case-control study evaluating the influence of three single nucleotide polymorphisms (SNPs) in XPA, ERCC5 and MTR [rs1800975 (G-4A), rs17655 (Asp1104His) and rs1805087 (A2756G), respectively] in lymphoma risk. 23818366

2013

dbSNP: rs61756766
rs61756766
0.010 GeneticVariation BEFREE Both the SS-lymphoma and SS-nonlymphoma patient subgroups exhibited significantly higher frequencies of the His159Tyr BAFF-R mutation compared to healthy controls (8.6% of SS-lymphoma patients and 6.2% of SS-nonlymphoma patients versus 1.7% of healthy controls; P = 0.02 and P = 0.04, respectively). 26097183

2015

dbSNP: rs2230926
rs2230926
0.040 GeneticVariation BEFREE The rs2230926 exonic variant was associated with an increased risk for pSS complicated by lymphoma (odds ratio, 3.36 [95% confidence interval, 1.34-8.42], and odds ratio, 3.26 [95% confidence interval, 1.31-8.12], vs controls and pSS patients without lymphoma, respectively; P = .011). 24159176

2013

dbSNP: rs2230926
rs2230926
0.040 GeneticVariation BEFREE However, the rs2230926 variant allele seems to confer a higher risk to develop lymphoma in pSS patients, while in RA patients, the presence of RF resulted significantly associated with the variant allele. 31534975

2019

dbSNP: rs2230926
rs2230926
0.040 GeneticVariation BEFREE A germline and coding polymorphism (rs2230926) of TNFAIP3 (A20), a central gatekeeper of nuclear factor-kappa B (NF-kB) activation, was recently found associated with primary Sjögren's syndrome (pSS)-associated lymphoma in a French cohort.We aimed to replicate this association. 26338037

2016

dbSNP: rs2230926
rs2230926
0.040 GeneticVariation BEFREE Increased prevalence of the rs2230926 mutant variant was detected in both SS-lymphoma and SS-nonlymphoma subgroups compared to HC (8.8% vs. 7.6% vs. 3.6%, <i>p</i> values: 0.04 and 0.03, respectively) in association with higher IgM, LDH serum levels, and PB <i>Bcl-XL</i> transcripts but lower leucocyte and neutrophil counts. 30662920

2018